Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC83Q8IWF9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 AC236430.1-201ENST00000402231 743 ntBASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 BCRP1-201ENST00000444246 691 ntBASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 AC093433.1-201ENST00000458048 571 ntBASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC83Q8IWF9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 AC002472.2-201ENST00000442739 958 ntBASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 FAM207CP-201ENST00000443486 507 ntBASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ENPP7P5-201ENST00000541031 1031 ntBASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 AP001063.1-201ENST00000568332 529 ntBASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 AL603764.1-201ENST00000636452 321 ntBASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms