Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AC015802.1-201ENST00000588104 1449 ntBASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AC002472.2-201ENST00000442739 958 ntBASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 API5-211ENST00000534695 560 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 RN7SL204P-201ENST00000582831 262 ntBASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00346Q8IVM7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms