Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AC114501.1-201ENST00000445949 172 ntBASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 RN7SL530P-201ENST00000485097 298 ntBASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 RPL17P45-201ENST00000586289 509 ntBASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPAS4Q8IUM7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 FTH1P22-201ENST00000456305 520 ntBASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 RN7SL81P-201ENST00000493781 261 ntBASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AL022334.2-201ENST00000610000 484 ntBASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 AC139712.1-201ENST00000378256 1875 ntBASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.76■□□□□ 0.11
NPAS4Q8IUM7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 RPL18AP3-201ENST00000462885 528 ntBASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 ACE3P-201ENST00000423435 1973 ntBASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPAS4Q8IUM7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms