Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 HLA-V-201ENST00000429037 534 ntBASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 COX5BP1-201ENST00000507622 393 ntBASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 AC023310.1-201ENST00000554836 735 ntBASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 MIR6074-201ENST00000612054 107 ntBASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 AL009178.2-201ENST00000597278 2719 ntBASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM90A1Q86YD7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 RN7SKP175-201ENST00000408472 289 ntBASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 CSF2RBP1-201ENST00000447905 391 ntBASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 RN7SL713P-201ENST00000582127 302 ntBASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 AC073413.1-201ENST00000603927 732 ntBASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 AC009093.2-202ENST00000620513 2079 ntBASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
FAM90A1Q86YD7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms