Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 SPDYE18-201ENST00000510091 1050 ntBASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 AC022447.6-201ENST00000515522 438 ntBASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 RARRES2P5-201ENST00000564013 466 ntBASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 AL049840.4-201ENST00000602422 811 ntBASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 AL137784.3-201ENST00000623858 2288 ntBASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.65□□□□□ -0.22
SMARCD3Q6STE5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SMARCD3Q6STE5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SMARCD3Q6STE5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.64□□□□□ -0.23
SMARCD3Q6STE5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms