Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 BANF1P1-201ENST00000553684 263 ntBASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AC010336.2-201ENST00000564226 506 ntBASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 IGHV3-72-202ENST00000621503 303 ntBASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AC007431.3-201ENST00000623221 587 ntBASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AP001282.1-201ENST00000531301 1499 ntBASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AL023775.1-201ENST00000454907 1746 ntBASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 FAM90A12P-201ENST00000519497 2375 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 FAM90A24P-201ENST00000520792 2369 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AL080243.2-201ENST00000418783 582 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 DFFBP1-201ENST00000433250 979 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AC011495.1-201ENST00000498085 584 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AC044860.1-202ENST00000559481 777 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 WASH4P-201ENST00000564273 1246 ntBASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXR1Q6PIV2 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms