Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 DANCR-204ENST00000444958 709 ntTSL 3 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 LINC00265-3P-201ENST00000447588 903 ntBASIC7.57□□□□□ -1.2
LINC01554Q52M75 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 NTF6B-201ENST00000591913 560 ntBASIC7.57□□□□□ -1.2
LINC01554Q52M75 AL121672.3-201ENST00000608644 468 ntBASIC7.57□□□□□ -1.2
LINC01554Q52M75 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 AC066615.1-201ENST00000640911 628 ntBASIC7.57□□□□□ -1.2
LINC01554Q52M75 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 AC005921.3-201ENST00000623774 2151 ntBASIC7.57□□□□□ -1.2
LINC01554Q52M75 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 CSNK1G1-207ENST00000634654 2485 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01554Q52M75 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
LINC01554Q52M75 FAM95B1-212ENST00000592873 4692 ntBASIC7.57□□□□□ -1.2
LINC01554Q52M75 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 AC148477.5-201ENST00000625164 1645 ntBASIC7.56□□□□□ -1.2
LINC01554Q52M75 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 AL845472.1-202ENST00000624675 4080 ntBASIC7.56□□□□□ -1.2
LINC01554Q52M75 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 AC020658.7-201ENST00000624274 2442 ntBASIC7.56□□□□□ -1.2
LINC01554Q52M75 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01554Q52M75 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 CHCHD2P8-201ENST00000429873 447 ntBASIC7.56□□□□□ -1.2
LINC01554Q52M75 DAP-202ENST00000432074 1048 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 RN7SL606P-201ENST00000472779 293 ntBASIC7.56□□□□□ -1.2
LINC01554Q52M75 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01554Q52M75 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms