Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 AC093752.3-201ENST00000567343 901 ntBASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 AP001065.2-201ENST00000617205 644 ntBASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM71Q2Q1W2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AC009093.10-201ENST00000641956 1442 ntBASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 KRT18P9-201ENST00000604826 1300 ntBASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AL807761.2-201ENST00000422849 729 ntBASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 AC114501.1-201ENST00000445949 172 ntBASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 HLA-C-210ENST00000640219 976 ntBASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM71Q2Q1W2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AL136172.1-201ENST00000598590 1394 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms