Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
YBX1P67809 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 C2orf27AP3-201ENST00000434123 579 ntBASIC14.5□□□□□ -0.09
YBX1P67809 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 AC234783.1-201ENST00000441761 496 ntBASIC14.5□□□□□ -0.09
YBX1P67809 GPR53P-205ENST00000457298 1084 ntBASIC14.5□□□□□ -0.09
YBX1P67809 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 AL391280.1-201ENST00000506969 1062 ntBASIC14.5□□□□□ -0.09
YBX1P67809 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.5□□□□□ -0.09
YBX1P67809 AL354718.3-201ENST00000616414 581 ntBASIC14.5□□□□□ -0.09
YBX1P67809 CR382287.1-201ENST00000623954 586 ntBASIC14.5□□□□□ -0.09
YBX1P67809 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 AC107918.4-201ENST00000641966 3141 ntBASIC14.5□□□□□ -0.09
YBX1P67809 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
YBX1P67809 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
YBX1P67809 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.5□□□□□ -0.09
YBX1P67809 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 MIR658-201ENST00000385210 100 ntBASIC14.49□□□□□ -0.09
YBX1P67809 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
YBX1P67809 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.49□□□□□ -0.09
YBX1P67809 AC245100.3-201ENST00000441281 285 ntBASIC14.49□□□□□ -0.09
YBX1P67809 RPL7P3-201ENST00000441388 714 ntBASIC14.49□□□□□ -0.09
YBX1P67809 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms