Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.04■□□□□ -0
LIMK2P53671 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.04■□□□□ -0
LIMK2P53671 BAATP1-201ENST00000412284 1225 ntBASIC15.04■□□□□ -0
LIMK2P53671 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LIMK2P53671 AL355864.2-201ENST00000447420 863 ntBASIC15.04■□□□□ -0
LIMK2P53671 BNIP3P42-201ENST00000454982 569 ntBASIC15.04■□□□□ -0
LIMK2P53671 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.04■□□□□ -0
LIMK2P53671 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.04■□□□□ -0
LIMK2P53671 CLUHP6-201ENST00000580789 941 ntBASIC15.04■□□□□ -0
LIMK2P53671 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 BNIP3P29-201ENST00000598302 571 ntBASIC15.04■□□□□ -0
LIMK2P53671 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.04■□□□□ -0
LIMK2P53671 AC011447.5-201ENST00000616168 564 ntBASIC15.04■□□□□ -0
LIMK2P53671 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LIMK2P53671 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LIMK2P53671 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LIMK2P53671 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.04■□□□□ -0
LIMK2P53671 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.04■□□□□ -0
LIMK2P53671 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK2P53671 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.04■□□□□ -0
LIMK2P53671 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.04■□□□□ -0
LIMK2P53671 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LIMK2P53671 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.03■□□□□ -0
LIMK2P53671 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.03■□□□□ -0
LIMK2P53671 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.03■□□□□ -0
LIMK2P53671 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.03■□□□□ -0
LIMK2P53671 AC092658.1-201ENST00000505836 891 ntBASIC15.03■□□□□ -0
LIMK2P53671 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.03■□□□□ -0
LIMK2P53671 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.03■□□□□ -0
LIMK2P53671 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.03■□□□□ -0
LIMK2P53671 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 DUX4L47-201ENST00000566374 394 ntBASIC15.03■□□□□ -0
LIMK2P53671 AP001063.1-201ENST00000568332 529 ntBASIC15.03■□□□□ -0
LIMK2P53671 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.03■□□□□ -0
LIMK2P53671 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.03■□□□□ -0
LIMK2P53671 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 AC097376.2-205ENST00000610159 5334 ntBASIC15.03■□□□□ -0
LIMK2P53671 AC005840.4-201ENST00000541242 2494 ntBASIC15.03■□□□□ -0
LIMK2P53671 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LIMK2P53671 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LIMK2P53671 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.02■□□□□ -0
LIMK2P53671 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.02■□□□□ -0
LIMK2P53671 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.02■□□□□ -0
LIMK2P53671 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.02■□□□□ -0
LIMK2P53671 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.02■□□□□ -0
LIMK2P53671 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms