Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC012508.2-201ENST00000567613 1472 ntBASIC14.05□□□□□ -0.16
SMSP52788 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.05□□□□□ -0.16
SMSP52788 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SMSP52788 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 INTS4P2-202ENST00000614726 2019 ntBASIC14.04□□□□□ -0.16
SMSP52788 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.04□□□□□ -0.16
SMSP52788 AC007551.1-201ENST00000457394 519 ntBASIC14.04□□□□□ -0.16
SMSP52788 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.04□□□□□ -0.16
SMSP52788 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 RPSAP52-203ENST00000622976 1023 ntBASIC14.04□□□□□ -0.16
SMSP52788 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SMSP52788 MTHFR-210ENST00000641407 2387 ntBASIC14.04□□□□□ -0.16
SMSP52788 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SMSP52788 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SMSP52788 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMSP52788 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.04□□□□□ -0.16
SMSP52788 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SMSP52788 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
SMSP52788 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 C1QBPP1-201ENST00000400117 770 ntBASIC14.03□□□□□ -0.16
SMSP52788 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.03□□□□□ -0.16
SMSP52788 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.03□□□□□ -0.16
SMSP52788 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.03□□□□□ -0.16
SMSP52788 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.03□□□□□ -0.16
SMSP52788 AC010328.2-201ENST00000597698 1111 ntBASIC14.03□□□□□ -0.16
SMSP52788 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.03□□□□□ -0.16
SMSP52788 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms