Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AL138709.1-201ENST00000614840 1693 ntBASIC13.29□□□□□ -0.28
CSNK1A1P48729 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 NME2P1-201ENST00000426182 414 ntBASIC13.29□□□□□ -0.28
CSNK1A1P48729 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 USP32P1-208ENST00000506594 1164 ntBASIC13.29□□□□□ -0.28
CSNK1A1P48729 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 AC140479.7-201ENST00000636301 2332 ntBASIC13.29□□□□□ -0.28
CSNK1A1P48729 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSNK1A1P48729 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.29□□□□□ -0.28
CSNK1A1P48729 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 AC026748.1-201ENST00000624349 3251 ntBASIC13.28□□□□□ -0.28
CSNK1A1P48729 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms