Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15□□□□□ -0.01
LTBRP36941 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LTBRP36941 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15□□□□□ -0.01
LTBRP36941 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15□□□□□ -0.01
LTBRP36941 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LTBRP36941 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15□□□□□ -0.01
LTBRP36941 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.99□□□□□ -0.01
LTBRP36941 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
LTBRP36941 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.99□□□□□ -0.01
LTBRP36941 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.99□□□□□ -0.01
LTBRP36941 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LTBRP36941 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LTBRP36941 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LTBRP36941 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 AC004522.1-201ENST00000419978 654 ntBASIC14.99□□□□□ -0.01
LTBRP36941 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.99□□□□□ -0.01
LTBRP36941 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.99□□□□□ -0.01
LTBRP36941 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.99□□□□□ -0.01
LTBRP36941 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.99□□□□□ -0.01
LTBRP36941 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.99□□□□□ -0.01
LTBRP36941 AC018846.1-201ENST00000568231 183 ntBASIC14.99□□□□□ -0.01
LTBRP36941 SNORD3B-1-201ENST00000577988 758 ntBASIC14.99□□□□□ -0.01
LTBRP36941 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.99□□□□□ -0.01
LTBRP36941 AL021707.6-201ENST00000609212 491 ntBASIC14.99□□□□□ -0.01
LTBRP36941 LINC00528-201ENST00000600723 2160 ntBASIC14.99□□□□□ -0.01
LTBRP36941 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.99□□□□□ -0.01
LTBRP36941 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.99□□□□□ -0.01
LTBRP36941 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.99□□□□□ -0.01
LTBRP36941 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.99□□□□□ -0.01
LTBRP36941 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LTBRP36941 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.99□□□□□ -0.01
LTBRP36941 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 AC112693.3-201ENST00000624819 1983 ntBASIC14.98□□□□□ -0.01
LTBRP36941 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LTBRP36941 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 CICP23-201ENST00000605013 2741 ntBASIC14.98□□□□□ -0.01
LTBRP36941 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.98□□□□□ -0.01
LTBRP36941 PPP1R2P4-201ENST00000424051 595 ntBASIC14.98□□□□□ -0.01
LTBRP36941 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 AC023906.1-201ENST00000486386 453 ntBASIC14.98□□□□□ -0.01
LTBRP36941 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.98□□□□□ -0.01
LTBRP36941 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.98□□□□□ -0.01
LTBRP36941 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 AC140658.4-201ENST00000561990 352 ntBASIC14.98□□□□□ -0.01
LTBRP36941 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.98□□□□□ -0.01
LTBRP36941 AL160191.2-201ENST00000603975 601 ntBASIC14.98□□□□□ -0.01
LTBRP36941 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 AP000769.1-203ENST00000637245 208 ntBASIC14.98□□□□□ -0.01
LTBRP36941 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms