Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLCN1P35523 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCN1P35523 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLCN1P35523 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN1P35523 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CLCN1P35523 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 AL139400.1-201ENST00000366220 510 ntBASIC17■□□□□ 0.31
CLCN1P35523 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17■□□□□ 0.31
CLCN1P35523 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 HLA-J-203ENST00000494367 1087 ntBASIC17■□□□□ 0.31
CLCN1P35523 AC109322.1-201ENST00000524499 1264 ntBASIC17■□□□□ 0.31
CLCN1P35523 HNRNPUP1-201ENST00000554987 333 ntBASIC17■□□□□ 0.31
CLCN1P35523 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17■□□□□ 0.31
CLCN1P35523 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 AC111170.3-201ENST00000624282 2464 ntBASIC17■□□□□ 0.31
CLCN1P35523 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CLCN1P35523 TCAM1P-207ENST00000485295 1537 ntBASIC17■□□□□ 0.31
CLCN1P35523 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLCN1P35523 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 DNM1P41-201ENST00000623634 3350 ntBASIC17■□□□□ 0.31
CLCN1P35523 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN1P35523 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CLCN1P35523 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC16.99■□□□□ 0.31
CLCN1P35523 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN1P35523 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CLCN1P35523 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 RPL5P21-201ENST00000404620 815 ntBASIC16.99■□□□□ 0.31
CLCN1P35523 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN1P35523 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN1P35523 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN1P35523 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.99■□□□□ 0.31
CLCN1P35523 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.99■□□□□ 0.31
CLCN1P35523 SNHG9-202ENST00000564014 471 ntBASIC16.99■□□□□ 0.31
CLCN1P35523 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLCN1P35523 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN1P35523 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLCN1P35523 MIR497HG-202ENST00000572453 3838 ntBASIC16.99■□□□□ 0.31
CLCN1P35523 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN1P35523 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN1P35523 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN1P35523 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLCN1P35523 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLCN1P35523 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.98■□□□□ 0.31
CLCN1P35523 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.98■□□□□ 0.31
CLCN1P35523 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN1P35523 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms