Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 METTL21AP1-201ENST00000438852 635 ntBASIC15.79■□□□□ 0.12
CTNNA1P35221 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.79■□□□□ 0.12
CTNNA1P35221 RPL13AP25-201ENST00000484130 612 ntBASIC15.79■□□□□ 0.12
CTNNA1P35221 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 TPRX2P-201ENST00000535362 881 ntBASIC15.79■□□□□ 0.12
CTNNA1P35221 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.79■□□□□ 0.12
CTNNA1P35221 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 BRI3BPP1-201ENST00000594224 787 ntBASIC15.79■□□□□ 0.12
CTNNA1P35221 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.78■□□□□ 0.12
CTNNA1P35221 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.78■□□□□ 0.12
CTNNA1P35221 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CTNNA1P35221 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 KRT18P28-201ENST00000453838 1332 ntBASIC15.78■□□□□ 0.12
CTNNA1P35221 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CTNNA1P35221 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTNNA1P35221 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CTNNA1P35221 AL139094.1-201ENST00000405549 1188 ntBASIC15.78■□□□□ 0.12
CTNNA1P35221 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.78■□□□□ 0.12
CTNNA1P35221 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.78■□□□□ 0.12
CTNNA1P35221 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.78■□□□□ 0.12
CTNNA1P35221 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.78■□□□□ 0.12
CTNNA1P35221 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.78■□□□□ 0.12
CTNNA1P35221 AC023511.2-201ENST00000618803 211 ntBASIC15.78■□□□□ 0.12
CTNNA1P35221 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.78■□□□□ 0.12
CTNNA1P35221 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.78■□□□□ 0.12
CTNNA1P35221 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CTNNA1P35221 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.78■□□□□ 0.12
CTNNA1P35221 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTNNA1P35221 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CTNNA1P35221 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CTNNA1P35221 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CTNNA1P35221 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.77■□□□□ 0.12
CTNNA1P35221 MRPS18AP1-201ENST00000414458 589 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.77■□□□□ 0.12
CTNNA1P35221 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.77■□□□□ 0.12
CTNNA1P35221 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.77■□□□□ 0.12
CTNNA1P35221 DOC2GP-202ENST00000514950 1163 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.77■□□□□ 0.12
CTNNA1P35221 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTNNA1P35221 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms