Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A4P31645 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A4P31645 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A4P31645 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A4P31645 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A4P31645 AC006504.5-208ENST00000588784 2401 ntBASIC15.21■□□□□ 0.02
SLC6A4P31645 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A4P31645 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A4P31645 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A4P31645 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A4P31645 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 DPM3-202ENST00000368399 517 ntBASIC15.2■□□□□ 0.02
SLC6A4P31645 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC6A4P31645 TUBB8P8-201ENST00000458717 1058 ntBASIC15.2■□□□□ 0.02
SLC6A4P31645 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 AC103988.2-201ENST00000561804 725 ntBASIC15.2■□□□□ 0.02
SLC6A4P31645 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC6A4P31645 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A4P31645 MIR6720-201ENST00000611664 98 ntBASIC15.2■□□□□ 0.02
SLC6A4P31645 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A4P31645 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A4P31645 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A4P31645 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 AL008718.2-201ENST00000609206 1313 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A4P31645 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A4P31645 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A4P31645 AL157407.1-201ENST00000435784 904 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 AL645933.1-201ENST00000440087 609 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC6A4P31645 AC104073.2-201ENST00000453737 312 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A4P31645 RPL18P13-201ENST00000478088 569 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A4P31645 AC005962.1-201ENST00000584100 773 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A4P31645 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A4P31645 MBLAC2-202ENST00000514906 1936 ntBASIC15.19■□□□□ 0.02
SLC6A4P31645 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A4P31645 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms