Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LMO1P25800 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 PPT1-213ENST00000641319 2388 ntBASIC12.51□□□□□ -0.41
LMO1P25800 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 AC245100.3-201ENST00000441281 285 ntBASIC12.51□□□□□ -0.41
LMO1P25800 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.51□□□□□ -0.41
LMO1P25800 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.51□□□□□ -0.41
LMO1P25800 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 AC145423.3-201ENST00000615987 467 ntBASIC12.51□□□□□ -0.41
LMO1P25800 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
LMO1P25800 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.51□□□□□ -0.41
LMO1P25800 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.51□□□□□ -0.41
LMO1P25800 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LMO1P25800 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
LMO1P25800 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 MST1P2-201ENST00000457982 2291 ntBASIC12.5□□□□□ -0.41
LMO1P25800 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 AP006294.1-201ENST00000415407 339 ntBASIC12.5□□□□□ -0.41
LMO1P25800 POM121L8P-201ENST00000417732 1281 ntBASIC12.5□□□□□ -0.41
LMO1P25800 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.5□□□□□ -0.41
LMO1P25800 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 POM121L9P-203ENST00000441984 1285 ntBASIC12.5□□□□□ -0.41
LMO1P25800 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LMO1P25800 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.5□□□□□ -0.41
LMO1P25800 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.5□□□□□ -0.41
LMO1P25800 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms