Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC022144.1-201ENST00000602255 1580 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 RN7SL399P-201ENST00000471648 279 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC004890.2-204ENST00000481968 304 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC026434.2-201ENST00000506094 1078 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 SPDYE22P-201ENST00000582158 798 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AP001160.2-201ENST00000596071 487 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC079781.4-201ENST00000641908 219 ntBASIC13.88□□□□□ -0.19
TNFRSF1BP20333 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFRSF1BP20333 AC090505.1-201ENST00000430515 1834 ntBASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CICP17-201ENST00000418553 2377 ntBASIC13.87□□□□□ -0.19
TNFRSF1BP20333 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 TPRX2P-201ENST00000535362 881 ntBASIC13.87□□□□□ -0.19
TNFRSF1BP20333 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.87□□□□□ -0.19
TNFRSF1BP20333 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFRSF1BP20333 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms