Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.13□□□□□ -0.31
ATF1P18846 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ATF1P18846 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.13□□□□□ -0.31
ATF1P18846 TREML5P-201ENST00000421694 576 ntBASIC13.13□□□□□ -0.31
ATF1P18846 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
ATF1P18846 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 FAM86GP-201ENST00000448322 971 ntBASIC13.13□□□□□ -0.31
ATF1P18846 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.13□□□□□ -0.31
ATF1P18846 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.13□□□□□ -0.31
ATF1P18846 AL158212.4-201ENST00000624062 1286 ntBASIC13.13□□□□□ -0.31
ATF1P18846 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 AL356585.2-201ENST00000625078 2396 ntBASIC13.13□□□□□ -0.31
ATF1P18846 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 AC005562.1-201ENST00000583030 3219 ntBASIC13.13□□□□□ -0.31
ATF1P18846 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ATF1P18846 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ATF1P18846 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ATF1P18846 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ATF1P18846 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.12□□□□□ -0.31
ATF1P18846 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 MIR1233-2-201ENST00000408138 82 ntBASIC13.12□□□□□ -0.31
ATF1P18846 MIR1233-1-201ENST00000408722 82 ntBASIC13.12□□□□□ -0.31
ATF1P18846 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.12□□□□□ -0.31
ATF1P18846 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.12□□□□□ -0.31
ATF1P18846 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.12□□□□□ -0.31
ATF1P18846 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.12□□□□□ -0.31
ATF1P18846 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ATF1P18846 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATF1P18846 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.12□□□□□ -0.31
ATF1P18846 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.11□□□□□ -0.31
ATF1P18846 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
ATF1P18846 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.11□□□□□ -0.31
ATF1P18846 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.11□□□□□ -0.31
ATF1P18846 AC241585.1-201ENST00000433527 519 ntBASIC13.11□□□□□ -0.31
ATF1P18846 GAPDHP40-201ENST00000505218 1006 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms