Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 AC007541.1-201ENST00000570282 1469 ntBASIC13.78□□□□□ -0.2
BMP4P12644 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 AC015818.8-201ENST00000587907 1519 ntBASIC13.78□□□□□ -0.2
BMP4P12644 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
BMP4P12644 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.77□□□□□ -0.2
BMP4P12644 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BMP4P12644 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
BMP4P12644 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
BMP4P12644 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
BMP4P12644 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BMP4P12644 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.77□□□□□ -0.2
BMP4P12644 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
BMP4P12644 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 MIR661-201ENST00000384842 89 ntBASIC13.77□□□□□ -0.21
BMP4P12644 FO393414.2-201ENST00000405153 598 ntBASIC13.77□□□□□ -0.21
BMP4P12644 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 DFFBP1-201ENST00000433250 979 ntBASIC13.77□□□□□ -0.21
BMP4P12644 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 SPTLC1P1-201ENST00000447199 261 ntBASIC13.77□□□□□ -0.21
BMP4P12644 KRT17P7-201ENST00000451704 1104 ntBASIC13.77□□□□□ -0.21
BMP4P12644 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.77□□□□□ -0.21
BMP4P12644 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC13.77□□□□□ -0.21
BMP4P12644 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.77□□□□□ -0.21
BMP4P12644 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
BMP4P12644 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
BMP4P12644 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BMP4P12644 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 AL118506.1-201ENST00000601296 3082 ntBASIC13.76□□□□□ -0.21
BMP4P12644 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.76□□□□□ -0.21
BMP4P12644 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 AC098614.1-201ENST00000368528 745 ntBASIC13.76□□□□□ -0.21
BMP4P12644 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.76□□□□□ -0.21
BMP4P12644 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms