Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.87□□□□□ -0.19
UBL4AP11441 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
UBL4AP11441 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
UBL4AP11441 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.87□□□□□ -0.19
UBL4AP11441 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
UBL4AP11441 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 KRT8P35-201ENST00000483942 1338 ntBASIC13.87□□□□□ -0.19
UBL4AP11441 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.86□□□□□ -0.19
UBL4AP11441 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.86□□□□□ -0.19
UBL4AP11441 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 GIMAP3P-201ENST00000495150 836 ntBASIC13.86□□□□□ -0.19
UBL4AP11441 AC022137.2-201ENST00000503482 481 ntBASIC13.86□□□□□ -0.19
UBL4AP11441 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.86□□□□□ -0.19
UBL4AP11441 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.86□□□□□ -0.19
UBL4AP11441 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 DUX4L47-201ENST00000566374 394 ntBASIC13.86□□□□□ -0.19
UBL4AP11441 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.86□□□□□ -0.19
UBL4AP11441 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.86□□□□□ -0.19
UBL4AP11441 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
UBL4AP11441 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UBL4AP11441 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 AC131902.2-201ENST00000566892 2172 ntBASIC13.86□□□□□ -0.19
UBL4AP11441 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBL4AP11441 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UBL4AP11441 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 AC018442.1-201ENST00000421439 2061 ntBASIC13.86□□□□□ -0.19
UBL4AP11441 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 TCAF1P1-201ENST00000414990 2232 ntBASIC13.86□□□□□ -0.19
UBL4AP11441 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBL4AP11441 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.86□□□□□ -0.19
UBL4AP11441 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
UBL4AP11441 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBL4AP11441 AC023090.2-201ENST00000625182 2110 ntBASIC13.85□□□□□ -0.19
UBL4AP11441 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBL4AP11441 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms