Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RARAP10276 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RARAP10276 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RARAP10276 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.65■□□□□ 0.1
RARAP10276 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RARAP10276 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RARAP10276 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RARAP10276 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RARAP10276 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RARAP10276 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RARAP10276 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RARAP10276 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.1
RARAP10276 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
RARAP10276 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 OR2I1P-209ENST00000641730 5365 ntBASIC15.64■□□□□ 0.09
RARAP10276 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RARAP10276 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RARAP10276 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 AC138761.1-201ENST00000584393 385 ntBASIC15.64■□□□□ 0.09
RARAP10276 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RARAP10276 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.64■□□□□ 0.09
RARAP10276 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RARAP10276 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RARAP10276 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RARAP10276 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.63■□□□□ 0.09
RARAP10276 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RARAP10276 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.63■□□□□ 0.09
RARAP10276 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RARAP10276 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 ACTG1P3-201ENST00000431775 1114 ntBASIC15.63■□□□□ 0.09
RARAP10276 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.63■□□□□ 0.09
RARAP10276 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.63■□□□□ 0.09
RARAP10276 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms