Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.33□□□□□ -0.12
SP9P0CG40 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.33□□□□□ -0.12
SP9P0CG40 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP9P0CG40 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP9P0CG40 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.33□□□□□ -0.12
SP9P0CG40 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP9P0CG40 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP9P0CG40 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP9P0CG40 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP9P0CG40 WASH7P-201ENST00000488147 1351 ntBASIC14.33□□□□□ -0.12
SP9P0CG40 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SP9P0CG40 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SP9P0CG40 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SP9P0CG40 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.33□□□□□ -0.12
SP9P0CG40 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SP9P0CG40 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SP9P0CG40 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.32□□□□□ -0.12
SP9P0CG40 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.32□□□□□ -0.12
SP9P0CG40 AL512599.1-201ENST00000430724 685 ntBASIC14.32□□□□□ -0.12
SP9P0CG40 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 RN7SL375P-201ENST00000492442 298 ntBASIC14.32□□□□□ -0.12
SP9P0CG40 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 IGHEP2-201ENST00000519308 1256 ntBASIC14.32□□□□□ -0.12
SP9P0CG40 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.32□□□□□ -0.12
SP9P0CG40 SNORD3B-1-201ENST00000577988 758 ntBASIC14.32□□□□□ -0.12
SP9P0CG40 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.32□□□□□ -0.12
SP9P0CG40 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.32□□□□□ -0.12
SP9P0CG40 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SP9P0CG40 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SP9P0CG40 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP9P0CG40 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
SP9P0CG40 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
SP9P0CG40 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SP9P0CG40 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 AC106827.1-201ENST00000366454 431 ntBASIC14.31□□□□□ -0.12
SP9P0CG40 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.31□□□□□ -0.12
SP9P0CG40 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.31□□□□□ -0.12
SP9P0CG40 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.31□□□□□ -0.12
SP9P0CG40 NDUFB10P1-201ENST00000567319 521 ntBASIC14.31□□□□□ -0.12
SP9P0CG40 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.31□□□□□ -0.12
SP9P0CG40 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.31□□□□□ -0.12
SP9P0CG40 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms