Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC6P09630 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 LYPLA2P1-203ENST00000447689 696 ntBASIC16.62■□□□□ 0.25
HOXC6P09630 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC6P09630 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.62■□□□□ 0.25
HOXC6P09630 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 AC007326.1-201ENST00000604539 458 ntBASIC16.62■□□□□ 0.25
HOXC6P09630 AC084781.1-201ENST00000613737 656 ntBASIC16.62■□□□□ 0.25
HOXC6P09630 AL590440.2-201ENST00000641973 1595 ntBASIC16.62■□□□□ 0.25
HOXC6P09630 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HOXC6P09630 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC6P09630 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 AC138035.3-201ENST00000622706 2791 ntBASIC16.61■□□□□ 0.25
HOXC6P09630 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HOXC6P09630 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 AC012362.1-201ENST00000434906 739 ntBASIC16.61■□□□□ 0.25
HOXC6P09630 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXC6P09630 AC018463.1-201ENST00000456674 917 ntBASIC16.61■□□□□ 0.25
HOXC6P09630 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXC6P09630 ORAOV1P1-201ENST00000503108 395 ntBASIC16.61■□□□□ 0.25
HOXC6P09630 MRPL22P1-201ENST00000505398 616 ntBASIC16.61■□□□□ 0.25
HOXC6P09630 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC6P09630 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC6P09630 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.61■□□□□ 0.25
HOXC6P09630 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC6P09630 AL161773.1-201ENST00000624845 863 ntBASIC16.61■□□□□ 0.25
HOXC6P09630 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC6P09630 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC6P09630 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HOXC6P09630 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HOXC6P09630 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC6P09630 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXC6P09630 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC6P09630 AL162727.3-201ENST00000635661 2787 ntBASIC16.6■□□□□ 0.25
HOXC6P09630 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 AL109954.1-202ENST00000564051 2148 ntBASIC16.6■□□□□ 0.25
HOXC6P09630 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HOXC6P09630 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 PIN4P1-201ENST00000451079 396 ntBASIC16.6■□□□□ 0.25
HOXC6P09630 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 AC105137.3-201ENST00000617588 984 ntBASIC16.6■□□□□ 0.25
HOXC6P09630 AL132780.4-201ENST00000624870 1135 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms