Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.34■□□□□ 0.21
CLTAP09496 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLTAP09496 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLTAP09496 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLTAP09496 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLTAP09496 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.33■□□□□ 0.21
CLTAP09496 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLTAP09496 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.33■□□□□ 0.21
CLTAP09496 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLTAP09496 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLTAP09496 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.33■□□□□ 0.2
CLTAP09496 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLTAP09496 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.33■□□□□ 0.2
CLTAP09496 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.33■□□□□ 0.2
CLTAP09496 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLTAP09496 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 AC007274.1-201ENST00000439805 662 ntBASIC16.33■□□□□ 0.2
CLTAP09496 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.33■□□□□ 0.2
CLTAP09496 RN7SL713P-201ENST00000582127 302 ntBASIC16.33■□□□□ 0.2
CLTAP09496 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.33■□□□□ 0.2
CLTAP09496 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.33■□□□□ 0.2
CLTAP09496 AL033527.4-201ENST00000641026 673 ntBASIC16.33■□□□□ 0.2
CLTAP09496 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CLTAP09496 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLTAP09496 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLTAP09496 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.33■□□□□ 0.2
CLTAP09496 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLTAP09496 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 GRK6P1-201ENST00000400595 1711 ntBASIC16.33■□□□□ 0.2
CLTAP09496 AC007686.3-201ENST00000619017 3487 ntBASIC16.33■□□□□ 0.2
CLTAP09496 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLTAP09496 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.32■□□□□ 0.2
CLTAP09496 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.32■□□□□ 0.2
CLTAP09496 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 TUBB1P2-201ENST00000422712 1306 ntBASIC16.32■□□□□ 0.2
CLTAP09496 CNN2P10-201ENST00000443067 918 ntBASIC16.32■□□□□ 0.2
CLTAP09496 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.32■□□□□ 0.2
CLTAP09496 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.32■□□□□ 0.2
CLTAP09496 TUBB1P1-201ENST00000503144 1300 ntBASIC16.32■□□□□ 0.2
CLTAP09496 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.32■□□□□ 0.2
CLTAP09496 AP000593.2-201ENST00000542775 1433 ntBASIC16.32■□□□□ 0.2
CLTAP09496 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.32■□□□□ 0.2
CLTAP09496 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.32■□□□□ 0.2
CLTAP09496 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLTAP09496 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 ST20-AS1-201ENST00000560255 4223 ntBASIC16.32■□□□□ 0.2
CLTAP09496 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLTAP09496 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLTAP09496 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLTAP09496 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLTAP09496 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 AL138725.1-201ENST00000407347 1314 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms