Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.68□□□□□ -0.38
CD3DP04234 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.68□□□□□ -0.38
CD3DP04234 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 AC025048.3-201ENST00000590609 569 ntBASIC12.68□□□□□ -0.38
CD3DP04234 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 AC005702.4-201ENST00000618393 416 ntBASIC12.68□□□□□ -0.38
CD3DP04234 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 LINC00628-201ENST00000628516 1289 ntBASIC12.68□□□□□ -0.38
CD3DP04234 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CD3DP04234 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.68□□□□□ -0.38
CD3DP04234 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CD3DP04234 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD3DP04234 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.68□□□□□ -0.38
CD3DP04234 AL365181.3-201ENST00000605886 3222 ntBASIC12.67□□□□□ -0.38
CD3DP04234 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CD3DP04234 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CD3DP04234 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 TOMM22P5-201ENST00000416399 439 ntBASIC12.67□□□□□ -0.38
CD3DP04234 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
CD3DP04234 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.67□□□□□ -0.38
CD3DP04234 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.67□□□□□ -0.38
CD3DP04234 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.67□□□□□ -0.38
CD3DP04234 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.67□□□□□ -0.38
CD3DP04234 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.67□□□□□ -0.38
CD3DP04234 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 MEX3B-202ENST00000558133 4333 ntBASIC12.67□□□□□ -0.38
CD3DP04234 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.67□□□□□ -0.38
CD3DP04234 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD3DP04234 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.67□□□□□ -0.38
CD3DP04234 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CD3DP04234 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
CD3DP04234 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.66□□□□□ -0.38
CD3DP04234 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD3DP04234 HLA-A-201ENST00000376802 1334 ntBASIC12.66□□□□□ -0.38
CD3DP04234 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD3DP04234 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms