Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.97□□□□□ -0.17
OPN1SWP03999 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.97□□□□□ -0.17
OPN1SWP03999 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.97□□□□□ -0.17
OPN1SWP03999 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.97□□□□□ -0.17
OPN1SWP03999 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 AC004890.2-204ENST00000481968 304 ntBASIC13.97□□□□□ -0.17
OPN1SWP03999 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.97□□□□□ -0.17
OPN1SWP03999 TPRX2P-201ENST00000535362 881 ntBASIC13.97□□□□□ -0.17
OPN1SWP03999 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
OPN1SWP03999 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.97□□□□□ -0.17
OPN1SWP03999 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.97□□□□□ -0.17
OPN1SWP03999 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
OPN1SWP03999 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
OPN1SWP03999 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 AL645937.2-201ENST00000396808 931 ntBASIC13.96□□□□□ -0.17
OPN1SWP03999 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.96□□□□□ -0.17
OPN1SWP03999 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.96□□□□□ -0.17
OPN1SWP03999 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 RN7SL399P-201ENST00000471648 279 ntBASIC13.96□□□□□ -0.17
OPN1SWP03999 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.96□□□□□ -0.17
OPN1SWP03999 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
OPN1SWP03999 AL390955.2-201ENST00000603032 514 ntBASIC13.96□□□□□ -0.17
OPN1SWP03999 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.96□□□□□ -0.17
OPN1SWP03999 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
OPN1SWP03999 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
OPN1SWP03999 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
OPN1SWP03999 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
OPN1SWP03999 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
OPN1SWP03999 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
OPN1SWP03999 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
OPN1SWP03999 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
OPN1SWP03999 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
OPN1SWP03999 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
OPN1SWP03999 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
OPN1SWP03999 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 AC089987.1-201ENST00000551654 2209 ntBASIC13.95□□□□□ -0.18
OPN1SWP03999 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
OPN1SWP03999 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
OPN1SWP03999 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.95□□□□□ -0.18
OPN1SWP03999 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
OPN1SWP03999 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
OPN1SWP03999 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
OPN1SWP03999 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
OPN1SWP03999 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms