Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCA5LO95447 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCA5LO95447 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LCA5LO95447 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCA5LO95447 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LCA5LO95447 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.78■□□□□ 0.12
LCA5LO95447 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.78■□□□□ 0.12
LCA5LO95447 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 ALG3P1-201ENST00000508806 1114 ntBASIC15.78■□□□□ 0.12
LCA5LO95447 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LCA5LO95447 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.78■□□□□ 0.12
LCA5LO95447 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 AC005498.2-205ENST00000593218 784 ntBASIC15.78■□□□□ 0.12
LCA5LO95447 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 AC093726.1-201ENST00000608064 963 ntBASIC15.78■□□□□ 0.12
LCA5LO95447 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.78■□□□□ 0.12
LCA5LO95447 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
LCA5LO95447 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCA5LO95447 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.77■□□□□ 0.12
LCA5LO95447 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LCA5LO95447 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LCA5LO95447 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LCA5LO95447 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LCA5LO95447 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LCA5LO95447 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.77■□□□□ 0.12
LCA5LO95447 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LCA5LO95447 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCA5LO95447 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.77■□□□□ 0.12
LCA5LO95447 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.77■□□□□ 0.12
LCA5LO95447 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.77■□□□□ 0.12
LCA5LO95447 MESTP3-201ENST00000503460 968 ntBASIC15.77■□□□□ 0.12
LCA5LO95447 AC104596.2-201ENST00000512793 793 ntBASIC15.77■□□□□ 0.12
LCA5LO95447 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.77■□□□□ 0.12
LCA5LO95447 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.77■□□□□ 0.11
LCA5LO95447 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
LCA5LO95447 AC073548.1-201ENST00000624088 1882 ntBASIC15.77■□□□□ 0.11
LCA5LO95447 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LCA5LO95447 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
LCA5LO95447 FAM90A12P-201ENST00000519497 2375 ntBASIC15.77■□□□□ 0.11
LCA5LO95447 FAM90A24P-201ENST00000520792 2369 ntBASIC15.77■□□□□ 0.11
LCA5LO95447 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.77■□□□□ 0.11
LCA5LO95447 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LCA5LO95447 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.77■□□□□ 0.11
LCA5LO95447 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LCA5LO95447 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.76■□□□□ 0.11
LCA5LO95447 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms