Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.02■□□□□ 0.16
CSPG5O95196 NAP1L6-202ENST00000641404 1222 ntBASIC16.02■□□□□ 0.16
CSPG5O95196 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.02■□□□□ 0.15
CSPG5O95196 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.02■□□□□ 0.15
CSPG5O95196 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.02■□□□□ 0.15
CSPG5O95196 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSPG5O95196 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 AL137783.1-201ENST00000623494 1896 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 AC011840.2-201ENST00000563063 1520 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CSPG5O95196 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 TUBB8P8-201ENST00000458717 1058 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 RN7SL181P-201ENST00000462921 277 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 AL353770.1-201ENST00000614915 403 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 AL805961.1-201ENST00000642026 753 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.01■□□□□ 0.15
CSPG5O95196 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 AC112504.1-201ENST00000623415 1841 ntBASIC16.01■□□□□ 0.15
CSPG5O95196 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSPG5O95196 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CSPG5O95196 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16■□□□□ 0.15
CSPG5O95196 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CSPG5O95196 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16■□□□□ 0.15
CSPG5O95196 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSPG5O95196 AC114501.1-201ENST00000445949 172 ntBASIC16■□□□□ 0.15
CSPG5O95196 MARK2P5-201ENST00000507649 634 ntBASIC16■□□□□ 0.15
CSPG5O95196 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16■□□□□ 0.15
CSPG5O95196 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16■□□□□ 0.15
CSPG5O95196 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16■□□□□ 0.15
CSPG5O95196 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CSPG5O95196 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16■□□□□ 0.15
CSPG5O95196 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16■□□□□ 0.15
CSPG5O95196 AL136295.7-201ENST00000619226 1200 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms