Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NDUFS3O75489 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFS3O75489 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFS3O75489 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFS3O75489 AL136379.1-201ENST00000623471 2642 ntBASIC14.89□□□□□ -0.03
NDUFS3O75489 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
NDUFS3O75489 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.89□□□□□ -0.03
NDUFS3O75489 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NDUFS3O75489 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFS3O75489 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.89□□□□□ -0.03
NDUFS3O75489 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFS3O75489 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
NDUFS3O75489 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NDUFS3O75489 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.88□□□□□ -0.03
NDUFS3O75489 AL354702.1-201ENST00000442006 1960 ntBASIC14.88□□□□□ -0.03
NDUFS3O75489 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.88□□□□□ -0.03
NDUFS3O75489 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.88□□□□□ -0.03
NDUFS3O75489 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.88□□□□□ -0.03
NDUFS3O75489 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.88□□□□□ -0.03
NDUFS3O75489 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 RPSAP52-203ENST00000622976 1023 ntBASIC14.88□□□□□ -0.03
NDUFS3O75489 AL358472.5-202ENST00000641448 1267 ntBASIC14.88□□□□□ -0.03
NDUFS3O75489 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NDUFS3O75489 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.88□□□□□ -0.03
NDUFS3O75489 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 AC003102.2-201ENST00000589195 1469 ntBASIC14.88□□□□□ -0.03
NDUFS3O75489 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFS3O75489 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NDUFS3O75489 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFS3O75489 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFS3O75489 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFS3O75489 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFS3O75489 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFS3O75489 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFS3O75489 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 AC097359.2-201ENST00000604992 2389 ntBASIC14.87□□□□□ -0.03
NDUFS3O75489 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.87□□□□□ -0.03
NDUFS3O75489 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFS3O75489 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.87□□□□□ -0.03
NDUFS3O75489 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFS3O75489 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.87□□□□□ -0.03
NDUFS3O75489 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFS3O75489 TPT1P11-201ENST00000458482 498 ntBASIC14.87□□□□□ -0.03
NDUFS3O75489 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFS3O75489 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFS3O75489 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.87□□□□□ -0.03
NDUFS3O75489 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.87□□□□□ -0.03
NDUFS3O75489 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NDUFS3O75489 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.87□□□□□ -0.03
NDUFS3O75489 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.87□□□□□ -0.03
NDUFS3O75489 MIR3197-201ENST00000582241 73 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms