Protein–RNA interactions for Protein: O75419

CDC45, Cell division control protein 45 homolog, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45O75419 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDC45O75419 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.1■□□□□ 0.49
CDC45O75419 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC45O75419 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC45O75419 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.1■□□□□ 0.49
CDC45O75419 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 WASH4P-201ENST00000564273 1246 ntBASIC18.1■□□□□ 0.49
CDC45O75419 WFDC1-204ENST00000613603 549 ntBASIC18.1■□□□□ 0.49
CDC45O75419 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CDC45O75419 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC45O75419 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 AC215219.1-201ENST00000400706 1817 ntBASIC18.09■□□□□ 0.49
CDC45O75419 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC45O75419 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 AC011840.2-201ENST00000563063 1520 ntBASIC18.09■□□□□ 0.49
CDC45O75419 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDC45O75419 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC45O75419 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC45O75419 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 MIR770-201ENST00000390219 98 ntBASIC18.09■□□□□ 0.49
CDC45O75419 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDC45O75419 FAM207CP-201ENST00000443486 507 ntBASIC18.09■□□□□ 0.49
CDC45O75419 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 AC138696.2-201ENST00000607376 223 ntBASIC18.09■□□□□ 0.49
CDC45O75419 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC45O75419 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC45O75419 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 AC104581.4-201ENST00000623126 3052 ntBASIC18.09■□□□□ 0.49
CDC45O75419 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC45O75419 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDC45O75419 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDC45O75419 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDC45O75419 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC18.08■□□□□ 0.49
CDC45O75419 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDC45O75419 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.08■□□□□ 0.49
CDC45O75419 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDC45O75419 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 AC010327.5-201ENST00000586923 3061 ntBASIC18.08■□□□□ 0.49
CDC45O75419 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CDC45O75419 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CDC45O75419 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDC45O75419 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.08■□□□□ 0.48
CDC45O75419 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.08■□□□□ 0.48
CDC45O75419 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.08■□□□□ 0.48
CDC45O75419 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDC45O75419 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.08■□□□□ 0.48
CDC45O75419 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC45O75419 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC45O75419 MIR6074-201ENST00000612054 107 ntBASIC18.08■□□□□ 0.48
CDC45O75419 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC45O75419 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CDC45O75419 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC45O75419 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC45O75419 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms