Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PDE6DO43924 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PDE6DO43924 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
PDE6DO43924 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PDE6DO43924 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.59□□□□□ -0.55
PDE6DO43924 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PDE6DO43924 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
PDE6DO43924 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
PDE6DO43924 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.58□□□□□ -0.55
PDE6DO43924 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
PDE6DO43924 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
PDE6DO43924 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
PDE6DO43924 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.58□□□□□ -0.55
PDE6DO43924 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.58□□□□□ -0.55
PDE6DO43924 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 AC215219.1-201ENST00000400706 1817 ntBASIC11.58□□□□□ -0.56
PDE6DO43924 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
PDE6DO43924 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.58□□□□□ -0.56
PDE6DO43924 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.58□□□□□ -0.56
PDE6DO43924 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.58□□□□□ -0.56
PDE6DO43924 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.58□□□□□ -0.56
PDE6DO43924 AC112191.1-201ENST00000523689 701 ntBASIC11.58□□□□□ -0.56
PDE6DO43924 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.58□□□□□ -0.56
PDE6DO43924 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 AC087388.1-201ENST00000571370 1112 ntBASIC11.58□□□□□ -0.56
PDE6DO43924 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.58□□□□□ -0.56
PDE6DO43924 MIR3652-201ENST00000579335 131 ntBASIC11.58□□□□□ -0.56
PDE6DO43924 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 AC068137.2-201ENST00000605408 478 ntBASIC11.58□□□□□ -0.56
PDE6DO43924 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.58□□□□□ -0.56
PDE6DO43924 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.58□□□□□ -0.56
PDE6DO43924 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PDE6DO43924 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
PDE6DO43924 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms