Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP2AO43633 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP2AO43633 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP2AO43633 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 FGD5P1-202ENST00000614866 2498 ntBASIC16.75■□□□□ 0.27
CHMP2AO43633 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHMP2AO43633 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 AC007292.2-201ENST00000593524 1812 ntBASIC16.75■□□□□ 0.27
CHMP2AO43633 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP2AO43633 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP2AO43633 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP2AO43633 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP2AO43633 CICP14-201ENST00000629111 2732 ntBASIC16.74■□□□□ 0.27
CHMP2AO43633 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP2AO43633 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP2AO43633 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP2AO43633 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC244157.2-201ENST00000616239 1006 ntBASIC16.74■□□□□ 0.27
CHMP2AO43633 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP2AO43633 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC006058.4-201ENST00000624016 1670 ntBASIC16.74■□□□□ 0.27
CHMP2AO43633 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP2AO43633 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC015656.1-201ENST00000624209 3578 ntBASIC16.74■□□□□ 0.27
CHMP2AO43633 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP2AO43633 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP2AO43633 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP2AO43633 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 MTHFR-210ENST00000641407 2387 ntBASIC16.73■□□□□ 0.27
CHMP2AO43633 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP2AO43633 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP2AO43633 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHMP2AO43633 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP2AO43633 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP2AO43633 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms