Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDLIM1O00151 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PDLIM1O00151 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM1O00151 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PDLIM1O00151 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PDLIM1O00151 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PDLIM1O00151 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 AL353705.2-201ENST00000428243 662 ntBASIC14.28□□□□□ -0.12
PDLIM1O00151 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.28□□□□□ -0.12
PDLIM1O00151 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.28□□□□□ -0.12
PDLIM1O00151 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.28□□□□□ -0.12
PDLIM1O00151 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 AC140878.1-201ENST00000565277 250 ntBASIC14.28□□□□□ -0.12
PDLIM1O00151 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.28□□□□□ -0.12
PDLIM1O00151 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.28□□□□□ -0.12
PDLIM1O00151 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.28□□□□□ -0.12
PDLIM1O00151 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.28□□□□□ -0.12
PDLIM1O00151 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.28□□□□□ -0.12
PDLIM1O00151 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PDLIM1O00151 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PDLIM1O00151 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDLIM1O00151 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDLIM1O00151 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
PDLIM1O00151 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDLIM1O00151 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDLIM1O00151 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PDLIM1O00151 AC007787.1-201ENST00000588095 1583 ntBASIC14.27□□□□□ -0.12
PDLIM1O00151 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.27□□□□□ -0.12
PDLIM1O00151 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDLIM1O00151 AL035456.1-201ENST00000456064 1369 ntBASIC14.27□□□□□ -0.12
PDLIM1O00151 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDLIM1O00151 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.27□□□□□ -0.12
PDLIM1O00151 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.27□□□□□ -0.12
PDLIM1O00151 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM1O00151 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM1O00151 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM1O00151 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.27□□□□□ -0.13
PDLIM1O00151 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM1O00151 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM1O00151 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PDLIM1O00151 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.27□□□□□ -0.13
PDLIM1O00151 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.27□□□□□ -0.13
PDLIM1O00151 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDLIM1O00151 AC125807.1-201ENST00000483097 614 ntBASIC14.27□□□□□ -0.13
PDLIM1O00151 TMEM198B-204ENST00000484016 896 ntBASIC14.27□□□□□ -0.13
PDLIM1O00151 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.27□□□□□ -0.13
PDLIM1O00151 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms