Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 AC006529.1-201ENST00000459978 637 ntBASIC16.5■□□□□ 0.23
LOC285556D6RIA3 AC013553.1-201ENST00000560906 267 ntBASIC16.5■□□□□ 0.23
LOC285556D6RIA3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 LINC00244-201ENST00000625073 613 ntBASIC16.5■□□□□ 0.23
LOC285556D6RIA3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
LOC285556D6RIA3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 BX679664.3-201ENST00000414070 555 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC113935.1-201ENST00000471722 555 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 RNA5SP406-201ENST00000516106 112 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 MYADML-201ENST00000474610 2147 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 KRT18P46-201ENST00000435568 1279 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC226150.1-201ENST00000544259 466 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC092384.3-202ENST00000564646 2873 ntBASIC16.49■□□□□ 0.23
LOC285556D6RIA3 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.49■□□□□ 0.23
LOC285556D6RIA3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 AL672207.1-201ENST00000328462 1570 ntBASIC16.48■□□□□ 0.23
LOC285556D6RIA3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 RPL35P9-201ENST00000446059 350 ntBASIC16.48■□□□□ 0.23
LOC285556D6RIA3 AL135901.1-201ENST00000451812 333 ntBASIC16.48■□□□□ 0.23
LOC285556D6RIA3 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 RN7SL767P-201ENST00000493013 295 ntBASIC16.48■□□□□ 0.23
LOC285556D6RIA3 AC106047.2-201ENST00000511723 743 ntBASIC16.48■□□□□ 0.23
LOC285556D6RIA3 DNM1P51-201ENST00000558149 522 ntBASIC16.48■□□□□ 0.23
LOC285556D6RIA3 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LOC285556D6RIA3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms