Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 HSPA7-201ENST00000445535 1927 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AL157407.1-201ENST00000435784 904 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 HSPB1P2-201ENST00000448722 546 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AL583810.1-201ENST00000553344 1045 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC010328.2-201ENST00000597698 1111 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC009542.2-202ENST00000619004 1067 ntBASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV5-4A0A0C4DH59 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AL645933.1-201ENST00000440087 609 ntBASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 RPSAP36-202ENST00000494591 1261 ntBASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AL162426.1-201ENST00000624141 743 ntBASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC152010.1-201ENST00000415779 2006 ntBASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV5-4A0A0C4DH59 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC067930.6-201ENST00000623257 4947 ntBASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 AC244394.1-201ENST00000435000 1665 ntBASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV5-4A0A0C4DH59 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms