Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 FAM220CP-201ENST00000395253 831 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AC007322.1-201ENST00000426983 750 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ECEL1P2-202ENST00000465689 757 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AP002982.1-201ENST00000492365 877 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AC060766.5-201ENST00000590539 871 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AC110285.6-201ENST00000617652 491 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AC012354.3-201ENST00000623734 483 ntBASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 TP73-201ENST00000346387 4854 ntTSL 5 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC018665.1-201ENST00000622927 1362 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC084364.1-201ENST00000551967 1556 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC012676.5-201ENST00000624337 1955 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 CICP19-201ENST00000632944 2357 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 MSNP1-201ENST00000511640 1732 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms