Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 AC104596.2-201ENST00000512793 793 ntBASIC18■□□□□ 0.47
DDX49Q9Y6V7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 HNRNPUP1-201ENST00000554987 333 ntBASIC18■□□□□ 0.47
DDX49Q9Y6V7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 MSTO2P-201ENST00000314835 1709 ntBASIC18■□□□□ 0.47
DDX49Q9Y6V7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18■□□□□ 0.47
DDX49Q9Y6V7 AL607033.1-201ENST00000623900 1599 ntBASIC18■□□□□ 0.47
DDX49Q9Y6V7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX49Q9Y6V7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AP000845.1-201ENST00000581677 2131 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 BNIP3P42-201ENST00000454982 569 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 FAM86LP-201ENST00000478302 853 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 BNIP3P29-201ENST00000598302 571 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AC097359.3-201ENST00000603982 1210 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AC011447.5-201ENST00000616168 564 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AL033527.4-201ENST00000641026 673 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 AC018665.1-201ENST00000622927 1362 ntBASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX49Q9Y6V7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 AC092135.3-201ENST00000624151 1846 ntBASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms