Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FAM86HP-204ENST00000513466 959 ntBASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 OR10B1P-201ENST00000601666 907 ntBASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AC138466.3-201ENST00000619983 221 ntBASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 TLE1P1-201ENST00000422965 589 ntBASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 HOMER2P2-201ENST00000451621 847 ntBASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 Z93015.1-201ENST00000451718 390 ntBASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 COX5BP1-201ENST00000507622 393 ntBASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 AP006547.1-201ENST00000563435 692 ntBASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A3BPQ9Y5P4 AC026748.1-201ENST00000624349 3251 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AC007969.1-201ENST00000433675 447 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 MESTP3-201ENST00000503460 968 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 FTLP10-202ENST00000505798 471 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AL391280.1-201ENST00000506969 1062 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AP003171.2-201ENST00000528208 925 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AC106820.3-201ENST00000561653 397 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms