Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 SPDYE12P-201ENST00000618416 771 ntBASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TCAF1P1-201ENST00000414990 2232 ntBASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 CICP20-201ENST00000443330 2801 ntBASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AC107918.4-201ENST00000641966 3141 ntBASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 KRT8P14-201ENST00000414254 1442 ntBASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AL353779.1-201ENST00000434793 351 ntBASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 TIMM17BP1-201ENST00000545713 516 ntBASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AL512356.2-201ENST00000546955 174 ntBASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms