Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC025048.3-201ENST00000590609 569 ntBASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC097359.3-201ENST00000603982 1210 ntBASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC004790.1-201ENST00000612686 536 ntBASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC005702.4-201ENST00000618393 416 ntBASIC13.24□□□□□ -0.29
DUX4Q9UBX2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 AC004840.1-201ENST00000636359 365 ntBASIC13.24□□□□□ -0.29
DUX4Q9UBX2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUX4Q9UBX2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 HSPA7-201ENST00000445535 1927 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TARDBPP1-201ENST00000442013 1203 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 BCRP1-201ENST00000444246 691 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AL512638.1-201ENST00000457493 794 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 LINC01115-203ENST00000606068 577 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 MIR6069-201ENST00000620069 79 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC022144.1-201ENST00000602255 1580 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC140479.7-201ENST00000636301 2332 ntBASIC13.23□□□□□ -0.29
DUX4Q9UBX2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUX4Q9UBX2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms