Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 PDIA3P1-201ENST00000471856 1510 ntBASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AC018442.1-201ENST00000421439 2061 ntBASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 MTHFR-210ENST00000641407 2387 ntBASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 CLUHP2-201ENST00000426660 1303 ntBASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 FAM21FP-201ENST00000426241 1131 ntBASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC078819.1-201ENST00000547454 765 ntBASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC012085.1-201ENST00000548270 765 ntBASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CUEDC1Q9NWM3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 CICP4-201ENST00000447359 2812 ntBASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms