Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 RPS9P1-201ENST00000419943 583 ntBASIC17.36■□□□□ 0.37
EFCC1Q9HA90 AC073150.1-201ENST00000450406 1084 ntBASIC17.36■□□□□ 0.37
EFCC1Q9HA90 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 MESTP3-201ENST00000503460 968 ntBASIC17.36■□□□□ 0.37
EFCC1Q9HA90 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 AL160314.3-201ENST00000556041 767 ntBASIC17.36■□□□□ 0.37
EFCC1Q9HA90 AC100827.2-201ENST00000563214 1194 ntBASIC17.36■□□□□ 0.37
EFCC1Q9HA90 MIR4683-201ENST00000579659 81 ntBASIC17.36■□□□□ 0.37
EFCC1Q9HA90 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EFCC1Q9HA90 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC079112.1-201ENST00000454972 939 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 DUX4L47-201ENST00000566374 394 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC141586.1-203ENST00000567242 366 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 MIR6842-201ENST00000612539 65 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AL603764.1-201ENST00000636452 321 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC074138.1-201ENST00000611182 1303 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 AC009090.5-201ENST00000624886 2285 ntBASIC17.35■□□□□ 0.37
EFCC1Q9HA90 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EFCC1Q9HA90 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms