Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 DPM3-202ENST00000368399 517 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC079178.1-201ENST00000420915 656 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AL603841.1-201ENST00000430516 664 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC004898.1-201ENST00000451057 766 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 RN7SL11P-201ENST00000471305 293 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SCARNA20.5-201ENST00000516991 142 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SCARNA21-201ENST00000517026 139 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC022217.1-201ENST00000521069 738 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 RN7SL774P-201ENST00000577467 290 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC020914.3-201ENST00000594712 304 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AL645939.5-201ENST00000606834 243 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC005332.10-201ENST00000612725 619 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC244452.3-201ENST00000636814 210 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AL645728.2-202ENST00000641679 227 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 POR-201ENST00000394893 2532 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC068418.2-201ENST00000577309 3703 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms