Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 AL109954.1-202ENST00000564051 2148 ntBASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.8■□□□□ 0.44
RTFDC1Q9BY42 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 GUSBP10-201ENST00000417412 665 ntBASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 KRT8P1-201ENST00000557533 1207 ntBASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AC138466.5-201ENST00000624002 808 ntBASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AC105917.1-201ENST00000506637 2539 ntBASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 AC139712.1-201ENST00000378256 1875 ntBASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTFDC1Q9BY42 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 AL512306.1-201ENST00000432698 848 ntBASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 ALG1L13P-202ENST00000519320 584 ntBASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 CICP6-201ENST00000457191 2729 ntBASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 AC091951.1-201ENST00000512854 2465 ntBASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTFDC1Q9BY42 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 AC092135.3-201ENST00000624151 1846 ntBASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 BCAS2P2-201ENST00000425064 674 ntBASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 CR383656.3-201ENST00000551315 183 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms