Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CR383656.2-201ENST00000548656 2254 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 REXO1L4P-201ENST00000605109 1937 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CYMP-203ENST00000474680 1263 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 AL391069.4-201ENST00000609583 481 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 AL645728.2-202ENST00000641679 227 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ACE3P-201ENST00000423435 1973 ntBASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CHRDL1Q9BU40 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 AC027796.2-201ENST00000575326 344 ntBASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms