Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 AC073548.1-201ENST00000624088 1882 ntBASIC14.56□□□□□ -0.08
EBF4Q9BQW3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EBF4Q9BQW3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 AC023141.5-201ENST00000458585 616 ntBASIC14.55□□□□□ -0.08
EBF4Q9BQW3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 AC011840.2-201ENST00000563063 1520 ntBASIC14.55□□□□□ -0.08
EBF4Q9BQW3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
EBF4Q9BQW3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AC090643.2-201ENST00000623442 2029 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 HLA-V-204ENST00000476601 1289 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 YBX1P5-201ENST00000509441 847 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AP000344.2-201ENST00000512987 629 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SDHAP3-202ENST00000515467 728 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AC004835.2-201ENST00000603762 682 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AL138828.2-201ENST00000615812 383 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AL158212.4-201ENST00000624062 1286 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms