Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 AZGP1P1-201ENST00000411909 902 ntBASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 AC108073.2-201ENST00000464002 357 ntBASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 AC008608.2-201ENST00000606089 416 ntBASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 AC072061.1-201ENST00000569710 2234 ntBASIC14.6□□□□□ -0.07
RAB3IPQ96QF0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SAPCD2P3-201ENST00000455031 850 ntBASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 RNA5SP410-201ENST00000516285 106 ntBASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 AC026979.3-201ENST00000607315 403 ntBASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB3IPQ96QF0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3IPQ96QF0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 KHSRPP1-201ENST00000427983 1768 ntBASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms