Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR5572-201ENST00000583188 137 ntBASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC008805.1-201ENST00000590892 364 ntBASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 MIR7845-201ENST00000618396 99 ntBASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 Z98259.2-201ENST00000641583 609 ntBASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 FAM90A7P-201ENST00000382628 1395 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 FAM90A23P-201ENST00000400136 1395 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 CEP164P1-201ENST00000455142 418 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 AC242376.1-201ENST00000559033 726 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 AC009884.2-201ENST00000603110 324 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 AC006453.1-201ENST00000636037 1257 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 MBLAC2-202ENST00000514906 1936 ntBASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNGAP1Q96PV0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AC006480.2-201ENST00000609770 1337 ntBASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AC003102.2-201ENST00000589195 1469 ntBASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 MIR4754-201ENST00000582477 89 ntBASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 AC138035.3-201ENST00000622706 2791 ntBASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNGAP1Q96PV0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms