Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 MTDHP5-201ENST00000598980 586 ntBASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 HLA-K-203ENST00000430151 1046 ntBASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AL513210.1-201ENST00000629608 234 ntBASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NSMCE2Q96MF7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 AC015818.8-201ENST00000587907 1519 ntBASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NSMCE2Q96MF7 AC004461.1-201ENST00000412461 403 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms